Tutorial at the ISMB 2023

17. Jul 2023 — 18. Jul 2023

Functional metagenomics made easy

Particpants To-Do list

  1. Run a metagenome analysis with tree commands
  2. Closer look at the reports
  3. Analyse the output of metagenome-atlas


Slides will be posted here after the tutorial.



Part 1: Monday, July 17 (14:00 – 18:00 CEST)

Part 2: Tuesday, July 18 (14:00 – 18:00 CEST)

Learning Objectives:

The participants will

  1. Learn to assemble genomes from metagenomic reads and estimate their quality
  2. Understand the steps used of gene annotation and pathway inference
  3. Use the functional and taxonomic annotation of a metagenome dataset to answer scientific questions.

Link to ISMB/ECCB 2023

Silas Kieser
Silas Kieser
Metagenome researcher

Husband, Father & Metagenome researcher