Functional metagenomics made easy

Particpants To-Do list

• Setup at the beginning of the course.
• Fill in the ISMB Feedback form at the end of the course.

Links to interactive Tutorials

1. Run a metagenome analysis with tree commands
2. Closer look at the reports
3. Analyse the output of metagenome-atlas

Slides

Slides will be posted here after the tutorial.

Instructors

• Silas Kieser
• Matija Tričković

Times

Part 1: Monday, July 17 (14:00 – 18:00 CEST)

Part 2: Tuesday, July 18 (14:00 – 18:00 CEST)

Learning Objectives:

The participants will

1. Learn to assemble genomes from metagenomic reads and estimate their quality
2. Understand the steps used of gene annotation and pathway inference
3. Use the functional and taxonomic annotation of a metagenome dataset to answer scientific questions.

Link to ISMB/ECCB 2023

I will give a virtual Tutorial about #metagenomeAtlas at #ISMBECCB2023 https://t.co/G1x5UWNikJ

— Dr. Silas Kieser (@SilasKieser) March 22, 2023